Light limitation on growth
I_lim.Rd
Calculates the relative limitation on growth rate due to light availability, via: $$I_{lim} = \frac{e}{K \cdot d_{top}} \times \Biggl[e^{-\frac{I_z e^{-K \cdot d_{top}}}{I_o}} - e^{-\frac{I_z}{I_o}} \Biggr]$$ where \(I_{z}=I e^{-k_W \cdot d_{top}}\) is the irradiance at the cultivation depth and \(K=k_{m}+kW\) is the total attenuation coefficient.
\(k_{m}\) is the additional attenuation coefficient from macroalgae biomass, calculated as: $$k_{m} = a_{cs} \times N_f \times \text{max} \Biggl( \frac{h_{m}}{d_{top}}, 1 \Biggr) \times \frac{1}{\text{min}(h_{m}, d_{top})}$$ where \(h_m\) is the macroalgae height.
Arguments
- Nf
Fixed nitrogen (mg m\(^{-3}\))
- I
the surface irradiance, PAR (\(\mu\)mol photons m\(^{-2}\) s\(^{-1}\))
- kW
the light attenuation coefficient for open water (m\(^{-1}\))
- spec_params
a vector of named numbers. Must include:
a_cs
, the carbon-specific self-shading constantI_o
, the light saturation parameterh_a
,h_b
andh_c
, parameters governing height change withN_f
h_max
, maximum species height
- site_params
A vector of named numbers. Must include:
\(d_{top}\) the below-surface depth (m) of the top of the macroalgae culture