Package index
-
a_armata
- Asparagopsis armata model parameters
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biomass_to_Nf()
- Convert biomass to Nf and Ns
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check_grow()
- Pre-check all parameters for grow_macroalgae()
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C_t()
- Total drag coefficient
-
env
- Example environmental time series data
-
get_limiting()
- Determine limiting factor in growth
-
get_uptake()
- Get the correct uptake rate
-
grow_macroalgae()
- Grow macroalgae
-
height()
- Macroalgae height
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I_lim()
- Light limitation on growth
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Kd_to_Secchi()
- Get Secchi depth from light attenuation parameter Kd
-
lin_uptake()
- Uptake rate (linear)
-
loss()
- Loss through fragmentation
-
MM_uptake()
- Uptake rate (Michaelis-Menton)
-
Nf_to_biomass()
- Convert Nf to biomass
-
Q_int()
- Non-dimensionalised internal nutrient quotient
-
Q_lim()
- Q_int limitation on growth
-
Q_rel()
- Relative nutrient quotient
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Secchi_to_Kd()
- Get light attenuation parameter Kd from Secchi depth
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site_params
- Default site parameters
-
solarMJ2ppfd()
- MJ to PPFD
-
S_lim()
- Salinity limitation on growth
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T_lim()
- Temperature limitation on growth
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u_b()
- Relative water attenuation beneath canopy
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u_c()
- Relative water attenuation within canopy